Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH1Q9Y2L9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 AC123595.1-201ENST00000440769 1046 ntBASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 AC053503.5-201ENST00000601508 636 ntBASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.15■□□□□ 0.5
LRCH1Q9Y2L9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH1Q9Y2L9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH1Q9Y2L9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
LRCH1Q9Y2L9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.14■□□□□ 0.5
LRCH1Q9Y2L9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH1Q9Y2L9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 AC245052.3-201ENST00000450182 901 ntBASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 EEF1DP3-203ENST00000566025 782 ntBASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 AC087623.3-201ENST00000607047 1098 ntBASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 AC080080.1-201ENST00000625121 2420 ntBASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH1Q9Y2L9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms