Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 AP001412.1-201ENST00000608405 714 ntBASIC17.98■□□□□ 0.47
RNF6Q9Y252 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF6Q9Y252 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF6Q9Y252 KRT17P2-201ENST00000300992 1314 ntBASIC17.98■□□□□ 0.47
RNF6Q9Y252 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 BX088651.1-201ENST00000540551 451 ntBASIC17.97■□□□□ 0.47
RNF6Q9Y252 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 AL049637.2-201ENST00000641778 930 ntBASIC17.97■□□□□ 0.47
RNF6Q9Y252 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF6Q9Y252 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF6Q9Y252 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 LINC01023-201ENST00000606054 436 ntBASIC17.96■□□□□ 0.47
RNF6Q9Y252 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 PTBP1P-201ENST00000554374 1601 ntBASIC17.96■□□□□ 0.47
RNF6Q9Y252 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 AL135905.2-201ENST00000584934 1404 ntBASIC17.96■□□□□ 0.47
RNF6Q9Y252 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF6Q9Y252 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF6Q9Y252 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
RNF6Q9Y252 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.96■□□□□ 0.46
RNF6Q9Y252 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.96■□□□□ 0.46
RNF6Q9Y252 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RNF6Q9Y252 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms