Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 AC026396.1-201ENST00000419388 421 ntBASIC21.05■□□□□ 0.96
NOD1Q9Y239 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 AC034232.1-201ENST00000506026 1064 ntBASIC21.05■□□□□ 0.96
NOD1Q9Y239 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOD1Q9Y239 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NOD1Q9Y239 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.04■□□□□ 0.96
NOD1Q9Y239 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOD1Q9Y239 AL137060.1-201ENST00000618151 2648 ntBASIC21.04■□□□□ 0.96
NOD1Q9Y239 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOD1Q9Y239 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NOD1Q9Y239 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOD1Q9Y239 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NOD1Q9Y239 AC104417.2-201ENST00000562989 1793 ntBASIC21.02■□□□□ 0.96
NOD1Q9Y239 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NOD1Q9Y239 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NOD1Q9Y239 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NOD1Q9Y239 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NOD1Q9Y239 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NOD1Q9Y239 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
NOD1Q9Y239 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NOD1Q9Y239 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.01■□□□□ 0.95
NOD1Q9Y239 AL645929.1-201ENST00000420084 975 ntBASIC21.01■□□□□ 0.95
NOD1Q9Y239 ATP5G2P1-201ENST00000433580 426 ntBASIC21.01■□□□□ 0.95
NOD1Q9Y239 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.01■□□□□ 0.95
NOD1Q9Y239 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NOD1Q9Y239 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms