Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 GPAT2P1-201ENST00000444924 1672 ntBASIC29■■■□□ 2.23
COL17A1Q9UMD9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
COL17A1Q9UMD9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 AL024507.2-201ENST00000606070 2574 ntBASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL17A1Q9UMD9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC28.98■■■□□ 2.23
COL17A1Q9UMD9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 MIR940-201ENST00000401276 94 ntBASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 AL390719.2-201ENST00000606993 987 ntBASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.97■■■□□ 2.23
COL17A1Q9UMD9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 RPL13AP23-201ENST00000480739 586 ntBASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC28.96■■■□□ 2.23
COL17A1Q9UMD9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
COL17A1Q9UMD9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 PLK5-205ENST00000642079 1969 ntBASIC28.95■■■□□ 2.22
COL17A1Q9UMD9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 AC098831.1-202ENST00000438821 336 ntBASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 AC091607.1-201ENST00000490318 1060 ntBASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 MIR3917-201ENST00000580971 93 ntBASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
COL17A1Q9UMD9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL17A1Q9UMD9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC28.93■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms