Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 AC091076.1-201ENST00000610741 619 ntBASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 AL358472.4-201ENST00000633140 710 ntBASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRIT1Q9P2V4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AL441883.1-201ENST00000566170 1045 ntBASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 SDHAP1-207ENST00000440850 2000 ntBASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRIT1Q9P2V4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 AP000523.1-201ENST00000398242 1049 ntBASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 TSPY21P-201ENST00000433481 731 ntBASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRIT1Q9P2V4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LRIT1Q9P2V4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.46■□□□□ 0.54
LRIT1Q9P2V4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.46■□□□□ 0.54
LRIT1Q9P2V4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TSPY23P-201ENST00000440136 739 ntBASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 AL359075.1-203ENST00000462729 1002 ntBASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRIT1Q9P2V4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms