Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 AC243591.1-201ENST00000452967 1364 ntBASIC20.28■□□□□ 0.84
CHD7Q9P2D1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 LINC00565-201ENST00000562710 2331 ntBASIC20.28■□□□□ 0.84
CHD7Q9P2D1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 AL353801.3-201ENST00000609898 542 ntBASIC20.28■□□□□ 0.84
CHD7Q9P2D1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CHD7Q9P2D1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.27■□□□□ 0.84
CHD7Q9P2D1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.27■□□□□ 0.84
CHD7Q9P2D1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD7Q9P2D1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.27■□□□□ 0.83
CHD7Q9P2D1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD7Q9P2D1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 Z83836.1-201ENST00000624605 1642 ntBASIC20.26■□□□□ 0.83
CHD7Q9P2D1 AKR1C7P-201ENST00000305623 895 ntBASIC20.26■□□□□ 0.83
CHD7Q9P2D1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD7Q9P2D1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 AC092720.2-201ENST00000602388 1665 ntBASIC20.25■□□□□ 0.83
CHD7Q9P2D1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CHD7Q9P2D1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 AC104417.2-201ENST00000562989 1793 ntBASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 AL157888.1-201ENST00000631930 593 ntBASIC20.24■□□□□ 0.83
CHD7Q9P2D1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CHD7Q9P2D1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD7Q9P2D1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms