Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 AL353807.1-201ENST00000427475 662 ntBASIC16.5■□□□□ 0.23
TREM2Q9NZC2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 AL355075.4-201ENST00000554988 638 ntBASIC16.5■□□□□ 0.23
TREM2Q9NZC2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.5■□□□□ 0.23
TREM2Q9NZC2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 Z82202.1-201ENST00000623446 1880 ntBASIC16.5■□□□□ 0.23
TREM2Q9NZC2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.5■□□□□ 0.23
TREM2Q9NZC2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 LINC01465-201ENST00000408887 1940 ntBASIC16.49■□□□□ 0.23
TREM2Q9NZC2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 AP003071.4-201ENST00000562276 1284 ntBASIC16.49■□□□□ 0.23
TREM2Q9NZC2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TREM2Q9NZC2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 C1QL1P1-201ENST00000568105 661 ntBASIC16.48■□□□□ 0.23
TREM2Q9NZC2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 AC073195.1-201ENST00000607241 877 ntBASIC16.48■□□□□ 0.23
TREM2Q9NZC2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.48■□□□□ 0.23
TREM2Q9NZC2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 AC020916.1-201ENST00000587762 1774 ntBASIC16.48■□□□□ 0.23
TREM2Q9NZC2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 LTB4R2-202ENST00000528054 3092 ntBASIC16.48■□□□□ 0.23
TREM2Q9NZC2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
TREM2Q9NZC2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.47■□□□□ 0.23
TREM2Q9NZC2 LINC01023-201ENST00000606054 436 ntBASIC16.47■□□□□ 0.23
TREM2Q9NZC2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms