Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 CROCCP1-201ENST00000426910 5675 ntBASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 AC103702.1-201ENST00000548801 2630 ntBASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 AC097381.1-201ENST00000429019 1296 ntBASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 AP001330.3-201ENST00000520123 633 ntBASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 MKRN4P-201ENST00000444706 1521 ntBASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHCHD3Q9NX63 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 KRT16P6-202ENST00000425692 1426 ntBASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 AC091305.1-201ENST00000479476 895 ntBASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 KRT18P20-201ENST00000548986 1279 ntBASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 AP001160.3-201ENST00000601484 763 ntBASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHCHD3Q9NX63 AC009113.1-201ENST00000570267 2443 ntBASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 AL356652.1-201ENST00000615962 565 ntBASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CHCHD3Q9NX63 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHCHD3Q9NX63 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms