Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.86■□□□□ 0.77
HCFC1R1Q9NWW0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 TSPY21P-201ENST00000433481 731 ntBASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 AC012313.10-201ENST00000623509 926 ntBASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 AC036111.1-201ENST00000533973 1582 ntBASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.85■□□□□ 0.77
HCFC1R1Q9NWW0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 HBZP1-201ENST00000354915 429 ntBASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 AC024243.1-201ENST00000609234 778 ntBASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCFC1R1Q9NWW0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 AL023284.2-201ENST00000405850 579 ntBASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 AL450487.1-201ENST00000426799 995 ntBASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 RASA4DP-201ENST00000460726 1199 ntBASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HCFC1R1Q9NWW0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HCFC1R1Q9NWW0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCFC1R1Q9NWW0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms