Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PARPBPQ9NWS1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.11■□□□□ 0.33
PARPBPQ9NWS1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PARPBPQ9NWS1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PARPBPQ9NWS1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 AC104417.2-201ENST00000562989 1793 ntBASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 SNORA78-201ENST00000459373 127 ntBASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PARPBPQ9NWS1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 AL020996.1-203ENST00000536896 2307 ntBASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.09■□□□□ 0.33
PARPBPQ9NWS1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.08■□□□□ 0.33
PARPBPQ9NWS1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 AC004951.3-201ENST00000418645 1148 ntBASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 AC116562.2-201ENST00000507042 360 ntBASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 MIR6786-201ENST00000616843 113 ntBASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.08■□□□□ 0.32
PARPBPQ9NWS1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 AL158211.5-201ENST00000623583 2518 ntBASIC17.07■□□□□ 0.32
PARPBPQ9NWS1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms