Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.51■□□□□ 0.39
RYDENQ9NUL5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 Z82202.1-201ENST00000623446 1880 ntBASIC17.5■□□□□ 0.39
RYDENQ9NUL5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 AC022494.1-201ENST00000466044 728 ntBASIC17.5■□□□□ 0.39
RYDENQ9NUL5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RYDENQ9NUL5 FEM1AP3-201ENST00000403722 1741 ntBASIC17.5■□□□□ 0.39
RYDENQ9NUL5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.49■□□□□ 0.39
RYDENQ9NUL5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC113347.1-201ENST00000413321 391 ntBASIC17.49■□□□□ 0.39
RYDENQ9NUL5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC007663.1-201ENST00000438948 1240 ntBASIC17.49■□□□□ 0.39
RYDENQ9NUL5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 AL031432.5-201ENST00000641059 760 ntBASIC17.49■□□□□ 0.39
RYDENQ9NUL5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RYDENQ9NUL5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 AL390955.1-201ENST00000428694 934 ntBASIC17.48■□□□□ 0.39
RYDENQ9NUL5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 AL157762.1-201ENST00000619612 415 ntBASIC17.48■□□□□ 0.39
RYDENQ9NUL5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 SDHAP1-207ENST00000440850 2000 ntBASIC17.48■□□□□ 0.39
RYDENQ9NUL5 CYP2D8P-201ENST00000433633 1490 ntBASIC17.48■□□□□ 0.39
RYDENQ9NUL5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RYDENQ9NUL5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RYDENQ9NUL5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RYDENQ9NUL5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RYDENQ9NUL5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms