Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 MIR1238-201ENST00000408483 83 ntBASIC17.98■□□□□ 0.47
KLHL1Q9NR64 YBX1P10-201ENST00000444752 975 ntBASIC17.98■□□□□ 0.47
KLHL1Q9NR64 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 AC018445.3-201ENST00000624177 1945 ntBASIC17.98■□□□□ 0.47
KLHL1Q9NR64 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHL1Q9NR64 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 AC079598.2-202ENST00000546624 1451 ntBASIC17.97■□□□□ 0.47
KLHL1Q9NR64 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TUBB8P6-201ENST00000436895 1288 ntBASIC17.97■□□□□ 0.47
KLHL1Q9NR64 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 C1QL1P1-201ENST00000568105 661 ntBASIC17.97■□□□□ 0.47
KLHL1Q9NR64 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TMEM179-206ENST00000616017 1645 ntBASIC17.97■□□□□ 0.47
KLHL1Q9NR64 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHL1Q9NR64 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.96■□□□□ 0.47
KLHL1Q9NR64 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 MIR1224-201ENST00000408193 85 ntBASIC17.96■□□□□ 0.47
KLHL1Q9NR64 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHL1Q9NR64 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
KLHL1Q9NR64 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
KLHL1Q9NR64 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 AL390955.1-201ENST00000428694 934 ntBASIC17.95■□□□□ 0.46
KLHL1Q9NR64 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.95■□□□□ 0.46
KLHL1Q9NR64 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms