Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 MIR4497-201ENST00000583208 89 ntBASIC20.16■□□□□ 0.82
GDF3Q9NR23 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.16■□□□□ 0.82
GDF3Q9NR23 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GDF3Q9NR23 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF3Q9NR23 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 NOC2LP1-202ENST00000452600 2235 ntBASIC20.15■□□□□ 0.82
GDF3Q9NR23 PCDHB18P-201ENST00000524813 2368 ntBASIC20.15■□□□□ 0.82
GDF3Q9NR23 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF3Q9NR23 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GDF3Q9NR23 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF3Q9NR23 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF3Q9NR23 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF3Q9NR23 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF3Q9NR23 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.14■□□□□ 0.81
GDF3Q9NR23 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF3Q9NR23 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDF3Q9NR23 NOC2LP2-201ENST00000407594 1944 ntBASIC20.14■□□□□ 0.81
GDF3Q9NR23 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.13■□□□□ 0.81
GDF3Q9NR23 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF3Q9NR23 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.13■□□□□ 0.81
GDF3Q9NR23 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 Z99916.2-201ENST00000604037 246 ntBASIC20.13■□□□□ 0.81
GDF3Q9NR23 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
GDF3Q9NR23 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF3Q9NR23 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms