Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AL135905.2-201ENST00000584934 1404 ntBASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
NECTIN3Q9NQS3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AC093484.2-201ENST00000580996 2166 ntBASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AC113410.3-201ENST00000623366 203 ntBASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AL049637.2-201ENST00000641778 930 ntBASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 KRT8P8-201ENST00000434750 1448 ntBASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
NECTIN3Q9NQS3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 AL596275.1-201ENST00000423464 877 ntBASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 AL353807.1-201ENST00000427475 662 ntBASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 AP002982.1-201ENST00000492365 877 ntBASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
NECTIN3Q9NQS3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms