Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NXF3Q9H4D5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 COX11P1-201ENST00000489116 835 ntBASIC20.66■□□□□ 0.9
NXF3Q9H4D5 AC063952.2-201ENST00000498792 1227 ntBASIC20.66■□□□□ 0.9
NXF3Q9H4D5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 AC073130.3-201ENST00000624389 2278 ntBASIC20.66■□□□□ 0.9
NXF3Q9H4D5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NXF3Q9H4D5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 AC008622.2-201ENST00000617006 1229 ntBASIC20.65■□□□□ 0.9
NXF3Q9H4D5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.65■□□□□ 0.9
NXF3Q9H4D5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
NXF3Q9H4D5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NXF3Q9H4D5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
NXF3Q9H4D5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NXF3Q9H4D5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
NXF3Q9H4D5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 RNF152P1-201ENST00000397754 604 ntBASIC20.64■□□□□ 0.89
NXF3Q9H4D5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AL512604.3-201ENST00000569583 964 ntBASIC20.64■□□□□ 0.89
NXF3Q9H4D5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AC011558.1-201ENST00000623459 338 ntBASIC20.64■□□□□ 0.89
NXF3Q9H4D5 AL023973.1-201ENST00000624619 620 ntBASIC20.64■□□□□ 0.89
NXF3Q9H4D5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NXF3Q9H4D5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 AC087388.1-201ENST00000571370 1112 ntBASIC20.63■□□□□ 0.89
NXF3Q9H4D5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NXF3Q9H4D5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.62■□□□□ 0.89
NXF3Q9H4D5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.62■□□□□ 0.89
NXF3Q9H4D5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms