Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 AL355877.3-201ENST00000622820 899 ntBASIC18.25■□□□□ 0.51
SPTBN4Q9H254 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPTBN4Q9H254 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AC138761.1-201ENST00000584393 385 ntBASIC18.24■□□□□ 0.51
SPTBN4Q9H254 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AL591684.3-201ENST00000605187 298 ntBASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AF228730.6-201ENST00000641497 218 ntBASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AC084121.3-201ENST00000641716 218 ntBASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AC105233.6-201ENST00000642093 218 ntBASIC18.24■□□□□ 0.51
SPTBN4Q9H254 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.24■□□□□ 0.51
SPTBN4Q9H254 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 NUS1P2-201ENST00000417358 873 ntBASIC18.23■□□□□ 0.51
SPTBN4Q9H254 KRT18P23-201ENST00000435622 1283 ntBASIC18.23■□□□□ 0.51
SPTBN4Q9H254 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 AC005229.4-201ENST00000610085 2198 ntBASIC18.23■□□□□ 0.51
SPTBN4Q9H254 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPTBN4Q9H254 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AC245100.3-201ENST00000441281 285 ntBASIC18.22■□□□□ 0.51
SPTBN4Q9H254 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AC008608.2-201ENST00000606089 416 ntBASIC18.22■□□□□ 0.51
SPTBN4Q9H254 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 GPAT2P1-201ENST00000444924 1672 ntBASIC18.22■□□□□ 0.51
SPTBN4Q9H254 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 C1orf229-201ENST00000623686 2258 ntBASIC18.22■□□□□ 0.51
SPTBN4Q9H254 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AC254562.1-201ENST00000417586 456 ntBASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPTBN4Q9H254 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 AL592071.1-201ENST00000611956 408 ntBASIC18.21■□□□□ 0.51
SPTBN4Q9H254 TMEM179-206ENST00000616017 1645 ntBASIC18.21■□□□□ 0.51
SPTBN4Q9H254 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPTBN4Q9H254 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms