Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 PILRA-201ENST00000198536 1316 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11.84□□□□□ -0.51
KRTAP3-3Q9BYR6 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC004023.1-201ENST00000561473 1744 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 KRTAP9-8-201ENST00000254072 960 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 SNORA63.3-201ENST00000362682 132 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 OR51B3P-201ENST00000412287 913 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 MTND4P20-201ENST00000424125 869 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 USP12PX-201ENST00000432383 1057 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 ZNF965P-201ENST00000432501 817 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC007272.1-201ENST00000448256 1269 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL603882.1-201ENST00000463059 681 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 RNU6-311P-201ENST00000516224 102 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 OR5G4P-201ENST00000525251 760 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 LRRC6P1-201ENST00000532188 885 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC121247.2-201ENST00000604776 136 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AL354811.1-201ENST00000610286 706 ntBASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 FAM153C-213ENST00000620373 1048 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 PUS3-205ENST00000613398 1419 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC11.83□□□□□ -0.52
KRTAP3-3Q9BYR6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 CD48-202ENST00000368046 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 ITGB3BP-202ENST00000371092 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC069282.1-201ENST00000411911 526 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 MTCO3P41-201ENST00000414801 328 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AL606495.1-201ENST00000422100 813 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC092447.4-201ENST00000436042 673 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC112247.1-201ENST00000436268 657 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 CICP18-202ENST00000436899 727 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 MTCO1P55-201ENST00000489829 745 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 MRPS18C-204ENST00000507019 666 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC084879.1-203ENST00000550470 1257 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 VN1R78P-201ENST00000597393 564 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AL139344.1-201ENST00000605228 195 ntBASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
KRTAP3-3Q9BYR6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms