Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
FOXC2Q99958 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
FOXC2Q99958 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 AC079776.4-201ENST00000511039 504 ntBASIC16.08■□□□□ 0.16
FOXC2Q99958 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXC2Q99958 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 AC093525.10-201ENST00000625130 1569 ntBASIC16.08■□□□□ 0.16
FOXC2Q99958 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXC2Q99958 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FOXC2Q99958 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
FOXC2Q99958 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXC2Q99958 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.07■□□□□ 0.16
FOXC2Q99958 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FOXC2Q99958 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.07■□□□□ 0.16
FOXC2Q99958 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.07■□□□□ 0.16
FOXC2Q99958 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FOXC2Q99958 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXC2Q99958 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXC2Q99958 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
FOXC2Q99958 KRT18P13-201ENST00000400056 1290 ntBASIC16.06■□□□□ 0.16
FOXC2Q99958 DRAXINP1-201ENST00000437611 948 ntBASIC16.06■□□□□ 0.16
FOXC2Q99958 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.06■□□□□ 0.16
FOXC2Q99958 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.06■□□□□ 0.16
FOXC2Q99958 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXC2Q99958 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXC2Q99958 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.06■□□□□ 0.16
FOXC2Q99958 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.06■□□□□ 0.16
FOXC2Q99958 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.06■□□□□ 0.16
FOXC2Q99958 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FOXC2Q99958 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.06■□□□□ 0.16
FOXC2Q99958 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
FOXC2Q99958 BX640515.1-201ENST00000617215 977 ntBASIC16.06■□□□□ 0.16
FOXC2Q99958 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FOXC2Q99958 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FOXC2Q99958 Z98882.1-201ENST00000622160 2253 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms