Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE1Q99829 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE1Q99829 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE1Q99829 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CPNE1Q99829 POM121L13P-201ENST00000422362 380 ntBASIC19.11■□□□□ 0.65
CPNE1Q99829 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE1Q99829 TSPY21P-201ENST00000433481 731 ntBASIC19.11■□□□□ 0.65
CPNE1Q99829 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CPNE1Q99829 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE1Q99829 PRKY-204ENST00000533551 1019 ntBASIC19.11■□□□□ 0.65
CPNE1Q99829 AC142086.2-201ENST00000569753 217 ntBASIC19.11■□□□□ 0.65
CPNE1Q99829 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE1Q99829 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE1Q99829 AC104581.1-202ENST00000635932 2618 ntBASIC19.11■□□□□ 0.65
CPNE1Q99829 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE1Q99829 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE1Q99829 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPNE1Q99829 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CPNE1Q99829 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE1Q99829 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE1Q99829 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 AC083906.6-201ENST00000641366 219 ntBASIC19.1■□□□□ 0.65
CPNE1Q99829 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE1Q99829 AC090164.3-201ENST00000610780 2143 ntBASIC19.1■□□□□ 0.65
CPNE1Q99829 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE1Q99829 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE1Q99829 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CPNE1Q99829 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CPNE1Q99829 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE1Q99829 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE1Q99829 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE1Q99829 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CPNE1Q99829 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CPNE1Q99829 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE1Q99829 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE1Q99829 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.08■□□□□ 0.65
CPNE1Q99829 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE1Q99829 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.08■□□□□ 0.65
CPNE1Q99829 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE1Q99829 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.08■□□□□ 0.65
CPNE1Q99829 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE1Q99829 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE1Q99829 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE1Q99829 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CPNE1Q99829 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.08■□□□□ 0.65
CPNE1Q99829 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE1Q99829 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE1Q99829 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE1Q99829 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CPNE1Q99829 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.08■□□□□ 0.64
CPNE1Q99829 AL160286.2-201ENST00000567150 934 ntBASIC19.08■□□□□ 0.64
CPNE1Q99829 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CPNE1Q99829 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.08■□□□□ 0.64
CPNE1Q99829 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE1Q99829 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms