Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.01■□□□□ 0.79
CDX2Q99626 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.01■□□□□ 0.79
CDX2Q99626 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.01■□□□□ 0.79
CDX2Q99626 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CDX2Q99626 MINOS1P3-201ENST00000457048 203 ntBASIC20.01■□□□□ 0.79
CDX2Q99626 VENTXP7-201ENST00000475503 772 ntBASIC20.01■□□□□ 0.79
CDX2Q99626 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.01■□□□□ 0.79
CDX2Q99626 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.01■□□□□ 0.79
CDX2Q99626 AC145285.3-201ENST00000564603 959 ntBASIC20.01■□□□□ 0.79
CDX2Q99626 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.01■□□□□ 0.79
CDX2Q99626 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDX2Q99626 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDX2Q99626 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20■□□□□ 0.79
CDX2Q99626 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20■□□□□ 0.79
CDX2Q99626 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
CDX2Q99626 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20■□□□□ 0.79
CDX2Q99626 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20■□□□□ 0.79
CDX2Q99626 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20■□□□□ 0.79
CDX2Q99626 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20■□□□□ 0.79
CDX2Q99626 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20■□□□□ 0.79
CDX2Q99626 AC092364.2-202ENST00000597012 1073 ntBASIC20■□□□□ 0.79
CDX2Q99626 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20■□□□□ 0.79
CDX2Q99626 AL591684.3-201ENST00000605187 298 ntBASIC20■□□□□ 0.79
CDX2Q99626 AC008608.2-201ENST00000606089 416 ntBASIC20■□□□□ 0.79
CDX2Q99626 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20■□□□□ 0.79
CDX2Q99626 AL355877.3-201ENST00000622820 899 ntBASIC20■□□□□ 0.79
CDX2Q99626 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDX2Q99626 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDX2Q99626 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDX2Q99626 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.99■□□□□ 0.79
CDX2Q99626 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDX2Q99626 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDX2Q99626 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.99■□□□□ 0.79
CDX2Q99626 AL023284.2-201ENST00000405850 579 ntBASIC19.99■□□□□ 0.79
CDX2Q99626 DNAJB3-201ENST00000446806 729 ntBASIC19.99■□□□□ 0.79
CDX2Q99626 DNAJB3-202ENST00000449667 1266 ntBASIC19.99■□□□□ 0.79
CDX2Q99626 AC091607.1-201ENST00000490318 1060 ntBASIC19.99■□□□□ 0.79
CDX2Q99626 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
CDX2Q99626 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.99■□□□□ 0.79
CDX2Q99626 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.99■□□□□ 0.79
CDX2Q99626 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.99■□□□□ 0.79
CDX2Q99626 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.99■□□□□ 0.79
CDX2Q99626 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDX2Q99626 FP700111.2-201ENST00000619190 1892 ntBASIC19.99■□□□□ 0.79
CDX2Q99626 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.98■□□□□ 0.79
CDX2Q99626 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CDX2Q99626 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDX2Q99626 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDX2Q99626 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 POM121L3P-201ENST00000419331 1163 ntBASIC19.98■□□□□ 0.79
CDX2Q99626 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 HNRNPDP1-201ENST00000439535 754 ntBASIC19.98■□□□□ 0.79
CDX2Q99626 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.98■□□□□ 0.79
CDX2Q99626 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.98■□□□□ 0.79
CDX2Q99626 HLA-J-203ENST00000494367 1087 ntBASIC19.98■□□□□ 0.79
CDX2Q99626 GUSBP12-201ENST00000513727 720 ntBASIC19.98■□□□□ 0.79
CDX2Q99626 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.98■□□□□ 0.79
CDX2Q99626 MIR3180-5-201ENST00000583743 153 ntBASIC19.98■□□□□ 0.79
CDX2Q99626 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDX2Q99626 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.98■□□□□ 0.79
CDX2Q99626 KRT18P28-201ENST00000453838 1332 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms