Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.84■□□□□ 0.29
PCNX1Q96RV3 FDX1P1-201ENST00000449115 551 ntBASIC16.84■□□□□ 0.29
PCNX1Q96RV3 AL732292.2-201ENST00000609649 430 ntBASIC16.84■□□□□ 0.29
PCNX1Q96RV3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.83■□□□□ 0.29
PCNX1Q96RV3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCNX1Q96RV3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCNX1Q96RV3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCNX1Q96RV3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 AL645929.1-201ENST00000420084 975 ntBASIC16.82■□□□□ 0.28
PCNX1Q96RV3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 CR769767.2-201ENST00000622735 460 ntBASIC16.82■□□□□ 0.28
PCNX1Q96RV3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCNX1Q96RV3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AL121672.3-201ENST00000608644 468 ntBASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AL162377.1-201ENST00000618844 1793 ntBASIC16.81■□□□□ 0.28
PCNX1Q96RV3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AC012615.1-201ENST00000565797 1299 ntBASIC16.81■□□□□ 0.28
PCNX1Q96RV3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.81■□□□□ 0.28
PCNX1Q96RV3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCNX1Q96RV3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 SEC1P-202ENST00000473944 940 ntBASIC16.8■□□□□ 0.28
PCNX1Q96RV3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCNX1Q96RV3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms