Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.3■□□□□ 0.84
TWNKQ96RR1 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.3■□□□□ 0.84
TWNKQ96RR1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 MMP23A-201ENST00000234610 1017 ntBASIC20.29■□□□□ 0.84
TWNKQ96RR1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 AC087499.1-201ENST00000418141 1075 ntBASIC20.29■□□□□ 0.84
TWNKQ96RR1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
TWNKQ96RR1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TWNKQ96RR1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 FEM1AP3-201ENST00000403722 1741 ntBASIC20.28■□□□□ 0.84
TWNKQ96RR1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.28■□□□□ 0.84
TWNKQ96RR1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
TWNKQ96RR1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TWNKQ96RR1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 AC010947.1-201ENST00000623454 693 ntBASIC20.27■□□□□ 0.84
TWNKQ96RR1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TWNKQ96RR1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TWNKQ96RR1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.27■□□□□ 0.83
TWNKQ96RR1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.27■□□□□ 0.83
TWNKQ96RR1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TWNKQ96RR1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TWNKQ96RR1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 AC073912.3-201ENST00000624414 853 ntBASIC20.26■□□□□ 0.83
TWNKQ96RR1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TWNKQ96RR1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TWNKQ96RR1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms