Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSMD1Q96PZ7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 KRT16P6-202ENST00000425692 1426 ntBASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AL121672.3-201ENST00000608644 468 ntBASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AC140113.2-201ENST00000604370 208 ntBASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSMD1Q96PZ7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 TSPY22P-201ENST00000427496 604 ntBASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 AF238378.1-201ENST00000526806 358 ntBASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.27■□□□□ 0.19
CSMD1Q96PZ7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 MIR940-201ENST00000401276 94 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 MIR4674-201ENST00000582457 87 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 KRT18P67-201ENST00000432816 1264 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 HLA-F-220ENST00000434407 884 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 AP005901.3-202ENST00000581653 237 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 AL773604.1-201ENST00000617417 272 ntBASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CSMD1Q96PZ7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSMD1Q96PZ7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSMD1Q96PZ7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms