Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL21A1Q96P44 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 AL158047.1-201ENST00000445918 881 ntBASIC18.05■□□□□ 0.48
COL21A1Q96P44 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.05■□□□□ 0.48
COL21A1Q96P44 AL138781.2-201ENST00000617896 1843 ntBASIC18.05■□□□□ 0.48
COL21A1Q96P44 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL21A1Q96P44 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 GCSHP5-201ENST00000443090 522 ntBASIC18.04■□□□□ 0.48
COL21A1Q96P44 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL21A1Q96P44 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL21A1Q96P44 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 ZNF815P-204ENST00000434898 1737 ntBASIC18.03■□□□□ 0.48
COL21A1Q96P44 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 TUBB8P6-201ENST00000436895 1288 ntBASIC18.03■□□□□ 0.48
COL21A1Q96P44 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 KRT18P16-201ENST00000510337 1294 ntBASIC18.03■□□□□ 0.48
COL21A1Q96P44 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 AC005082.1-201ENST00000413042 2259 ntBASIC18.03■□□□□ 0.48
COL21A1Q96P44 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
COL21A1Q96P44 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL21A1Q96P44 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL21A1Q96P44 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL21A1Q96P44 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL21A1Q96P44 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 KRT16P5-201ENST00000455284 522 ntBASIC18.02■□□□□ 0.48
COL21A1Q96P44 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.02■□□□□ 0.48
COL21A1Q96P44 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms