Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 AC104417.2-201ENST00000562989 1793 ntBASIC16.06■□□□□ 0.16
TIMD4Q96H15 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 HMGA1P5-201ENST00000412453 271 ntBASIC16.06■□□□□ 0.16
TIMD4Q96H15 TSPY21P-201ENST00000433481 731 ntBASIC16.06■□□□□ 0.16
TIMD4Q96H15 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMD4Q96H15 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TIMD4Q96H15 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 AC005521.1-201ENST00000393351 872 ntBASIC16.05■□□□□ 0.16
TIMD4Q96H15 RCN1P1-201ENST00000400413 996 ntBASIC16.05■□□□□ 0.16
TIMD4Q96H15 MIR1224-201ENST00000408193 85 ntBASIC16.05■□□□□ 0.16
TIMD4Q96H15 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 ECEL1P2-202ENST00000465689 757 ntBASIC16.05■□□□□ 0.16
TIMD4Q96H15 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 AC010653.2-201ENST00000623505 997 ntBASIC16.05■□□□□ 0.16
TIMD4Q96H15 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMD4Q96H15 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMD4Q96H15 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.04■□□□□ 0.16
TIMD4Q96H15 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TIMD4Q96H15 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TIMD4Q96H15 TERF1P1-201ENST00000311003 1181 ntBASIC16.03■□□□□ 0.16
TIMD4Q96H15 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TIMD4Q96H15 RN7SL850P-201ENST00000579959 291 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms