Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 KRT18P21-201ENST00000515767 1272 ntBASIC19.47■□□□□ 0.71
CCDC97Q96F63 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 AL121829.2-201ENST00000620908 328 ntBASIC19.47■□□□□ 0.71
CCDC97Q96F63 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC97Q96F63 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC97Q96F63 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC97Q96F63 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC97Q96F63 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 AC133681.1-201ENST00000465482 601 ntBASIC19.45■□□□□ 0.7
CCDC97Q96F63 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC97Q96F63 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 AC106820.2-201ENST00000563775 3264 ntBASIC19.45■□□□□ 0.7
CCDC97Q96F63 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC97Q96F63 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AL049637.2-201ENST00000641778 930 ntBASIC19.44■□□□□ 0.7
CCDC97Q96F63 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC97Q96F63 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC97Q96F63 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC97Q96F63 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC97Q96F63 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CCDC97Q96F63 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC97Q96F63 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms