Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.74■□□□□ 0.43
CTHRC1Q96CG8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CTHRC1Q96CG8 KRT17P2-201ENST00000300992 1314 ntBASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CTHRC1Q96CG8 AC006333.2-201ENST00000607957 2099 ntBASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 RBM17P1-201ENST00000453646 1190 ntBASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 AC097488.1-201ENST00000507834 756 ntBASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 AP005242.2-201ENST00000580065 1175 ntBASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.71■□□□□ 0.43
CTHRC1Q96CG8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms