Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.55■■□□□ 1.36
RPGRQ92834 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.55■■□□□ 1.36
RPGRQ92834 TSSC2-201ENST00000450217 709 ntBASIC23.55■■□□□ 1.36
RPGRQ92834 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.55■■□□□ 1.36
RPGRQ92834 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.55■■□□□ 1.36
RPGRQ92834 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
RPGRQ92834 AC011498.5-201ENST00000592027 486 ntBASIC23.55■■□□□ 1.36
RPGRQ92834 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.55■■□□□ 1.36
RPGRQ92834 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RPGRQ92834 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.54■■□□□ 1.36
RPGRQ92834 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RPGRQ92834 BX276092.5-203ENST00000456199 560 ntBASIC23.54■■□□□ 1.36
RPGRQ92834 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.54■■□□□ 1.36
RPGRQ92834 AL121672.3-201ENST00000608644 468 ntBASIC23.54■■□□□ 1.36
RPGRQ92834 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RPGRQ92834 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.54■■□□□ 1.36
RPGRQ92834 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RPGRQ92834 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.54■■□□□ 1.36
RPGRQ92834 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RPGRQ92834 GABARAPL3-202ENST00000624044 1851 ntBASIC23.53■■□□□ 1.36
RPGRQ92834 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.53■■□□□ 1.36
RPGRQ92834 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPGRQ92834 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
RPGRQ92834 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.53■■□□□ 1.36
RPGRQ92834 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
RPGRQ92834 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPGRQ92834 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.53■■□□□ 1.36
RPGRQ92834 AL023284.2-201ENST00000405850 579 ntBASIC23.53■■□□□ 1.36
RPGRQ92834 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.53■■□□□ 1.36
RPGRQ92834 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.53■■□□□ 1.36
RPGRQ92834 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.53■■□□□ 1.36
RPGRQ92834 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RPGRQ92834 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RPGRQ92834 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.53■■□□□ 1.36
RPGRQ92834 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RPGRQ92834 SDHAP1-207ENST00000440850 2000 ntBASIC23.52■■□□□ 1.36
RPGRQ92834 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RPGRQ92834 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.52■■□□□ 1.36
RPGRQ92834 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RPGRQ92834 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RPGRQ92834 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.52■■□□□ 1.36
RPGRQ92834 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.52■■□□□ 1.36
RPGRQ92834 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RPGRQ92834 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC23.51■■□□□ 1.35
RPGRQ92834 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.51■■□□□ 1.35
RPGRQ92834 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.51■■□□□ 1.35
RPGRQ92834 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.51■■□□□ 1.35
RPGRQ92834 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.51■■□□□ 1.35
RPGRQ92834 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.51■■□□□ 1.35
RPGRQ92834 AC016734.2-201ENST00000624325 1377 ntBASIC23.51■■□□□ 1.35
RPGRQ92834 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RPGRQ92834 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.5■■□□□ 1.35
RPGRQ92834 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.5■■□□□ 1.35
RPGRQ92834 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RPGRQ92834 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.5■■□□□ 1.35
RPGRQ92834 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.5■■□□□ 1.35
RPGRQ92834 MCCD1P1-208ENST00000445732 328 ntBASIC23.5■■□□□ 1.35
RPGRQ92834 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.5■■□□□ 1.35
RPGRQ92834 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.5■■□□□ 1.35
RPGRQ92834 MIR3180-5-201ENST00000583743 153 ntBASIC23.5■■□□□ 1.35
RPGRQ92834 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.5■■□□□ 1.35
RPGRQ92834 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.5■■□□□ 1.35
RPGRQ92834 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms