Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 RN7SL692P-201ENST00000464677 288 ntBASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 UNC93B6-202ENST00000528242 690 ntBASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AC093214.1-201ENST00000511688 1107 ntBASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 CU639417.3-201ENST00000624240 1404 ntBASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 FAM8A2P-201ENST00000528813 1142 ntBASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 TFAMP1-201ENST00000412727 736 ntBASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AL117328.2-201ENST00000624617 1940 ntBASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC7.75□□□□□ -1.17
SYNE2Q8WXH0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC026740.1-201ENST00000607068 791 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AP001269.4-201ENST00000609611 512 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC092506.1-202ENST00000401022 528 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 HLA-F-220ENST00000434407 884 ntBASIC7.74□□□□□ -1.17
SYNE2Q8WXH0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms