Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIMC1Q8NDZ2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 AL049812.1-201ENST00000432563 2267 ntBASIC18■□□□□ 0.47
SIMC1Q8NDZ2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SIMC1Q8NDZ2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SIMC1Q8NDZ2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 NIFKP9-201ENST00000419265 221 ntBASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 AF186192.3-201ENST00000583427 947 ntBASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms