Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCSK9Q8NBP7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 AL845331.1-201ENST00000424978 1190 ntBASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 MCCD1P1-208ENST00000445732 328 ntBASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 NUS1P1-201ENST00000446295 882 ntBASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 FDX1P1-201ENST00000449115 551 ntBASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 AL162741.1-201ENST00000565563 1558 ntBASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCSK9Q8NBP7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 AP002383.4-201ENST00000442518 975 ntBASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 AP002414.4-201ENST00000589764 1148 ntBASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 AC093525.10-201ENST00000625130 1569 ntBASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCSK9Q8NBP7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 CHCHD2P8-201ENST00000429873 447 ntBASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 KRT17P6-201ENST00000453795 1220 ntBASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 SEC1P-202ENST00000473944 940 ntBASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.08■□□□□ 0.97
PCSK9Q8NBP7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCSK9Q8NBP7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 HLA-F-220ENST00000434407 884 ntBASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCSK9Q8NBP7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms