Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01555Q8NAE3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC01555Q8NAE3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01555Q8NAE3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01555Q8NAE3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01555Q8NAE3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC01555Q8NAE3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 NAPSB-206ENST00000562112 1266 ntBASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 FP475955.4-201ENST00000623131 1990 ntBASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LINC01555Q8NAE3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AL161938.1-201ENST00000569833 2180 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 TSPY14P-201ENST00000303979 915 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 INGX-201ENST00000359239 846 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AC211429.1-201ENST00000415277 523 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AC012306.2-201ENST00000609350 630 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AC133561.5-201ENST00000635547 218 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 AL049812.1-201ENST00000432563 2267 ntBASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC01555Q8NAE3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC01555Q8NAE3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms