Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 BX119927.1-201ENST00000636596 1552 ntBASIC19.56■□□□□ 0.72
SIX5Q8N196 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.56■□□□□ 0.72
SIX5Q8N196 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SIX5Q8N196 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIX5Q8N196 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SIX5Q8N196 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
SIX5Q8N196 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 AP000593.1-201ENST00000393668 712 ntBASIC19.55■□□□□ 0.72
SIX5Q8N196 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 AP002383.4-201ENST00000442518 975 ntBASIC19.55■□□□□ 0.72
SIX5Q8N196 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.55■□□□□ 0.72
SIX5Q8N196 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 MIR4674-201ENST00000582457 87 ntBASIC19.55■□□□□ 0.72
SIX5Q8N196 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.55■□□□□ 0.72
SIX5Q8N196 AP002414.4-201ENST00000589764 1148 ntBASIC19.55■□□□□ 0.72
SIX5Q8N196 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SIX5Q8N196 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIX5Q8N196 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
SIX5Q8N196 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.55■□□□□ 0.72
SIX5Q8N196 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 AC007375.3-201ENST00000600936 2314 ntBASIC19.54■□□□□ 0.72
SIX5Q8N196 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SIX5Q8N196 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.54■□□□□ 0.72
SIX5Q8N196 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 NUS1P1-201ENST00000446295 882 ntBASIC19.54■□□□□ 0.72
SIX5Q8N196 EMBP1-201ENST00000458200 901 ntBASIC19.54■□□□□ 0.72
SIX5Q8N196 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.54■□□□□ 0.72
SIX5Q8N196 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.54■□□□□ 0.72
SIX5Q8N196 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.54■□□□□ 0.72
SIX5Q8N196 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
SIX5Q8N196 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.54■□□□□ 0.72
SIX5Q8N196 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIX5Q8N196 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SIX5Q8N196 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SIX5Q8N196 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.53■□□□□ 0.72
SIX5Q8N196 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.53■□□□□ 0.72
SIX5Q8N196 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SIX5Q8N196 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.53■□□□□ 0.72
SIX5Q8N196 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SIX5Q8N196 AL031008.1-201ENST00000619963 541 ntBASIC19.53■□□□□ 0.72
SIX5Q8N196 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIX5Q8N196 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX5Q8N196 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX5Q8N196 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SIX5Q8N196 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX5Q8N196 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.52■□□□□ 0.72
SIX5Q8N196 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.52■□□□□ 0.72
SIX5Q8N196 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.52■□□□□ 0.72
SIX5Q8N196 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX5Q8N196 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIX5Q8N196 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SIX5Q8N196 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms