Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AL391807.1-203ENST00000604392 2365 ntBASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AL023284.2-201ENST00000405850 579 ntBASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL27A1Q8IZC6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 AC092667.1-201ENST00000434301 2586 ntBASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 AL691432.3-201ENST00000621860 400 ntBASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL27A1Q8IZC6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL27A1Q8IZC6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL27A1Q8IZC6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COL27A1Q8IZC6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
COL27A1Q8IZC6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TSPY12P-201ENST00000421279 868 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 AP000347.1-202ENST00000435868 847 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 EMBP1-201ENST00000458200 901 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MIR3917-201ENST00000580971 93 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 KRT8P26-201ENST00000534154 1276 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 AL136038.4-201ENST00000603606 1261 ntBASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.01■□□□□ 0.47
COL27A1Q8IZC6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL27A1Q8IZC6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18■□□□□ 0.47
COL27A1Q8IZC6 DRAXINP1-201ENST00000437611 948 ntBASIC18■□□□□ 0.47
COL27A1Q8IZC6 AP002414.4-201ENST00000589764 1148 ntBASIC18■□□□□ 0.47
COL27A1Q8IZC6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 LBX2-AS1-202ENST00000603175 2083 ntBASIC18■□□□□ 0.47
COL27A1Q8IZC6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL27A1Q8IZC6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 TSSC2-201ENST00000450217 709 ntBASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.99■□□□□ 0.47
COL27A1Q8IZC6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms