Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.92■□□□□ 0.62
CPNE9Q8IYJ1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 AL160286.2-201ENST00000567150 934 ntBASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CPNE9Q8IYJ1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 RPPH1-201ENST00000516869 333 ntBASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE9Q8IYJ1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE9Q8IYJ1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 IRX1P1-201ENST00000438849 1838 ntBASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE9Q8IYJ1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 KRT18P29-201ENST00000397031 1267 ntBASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 ITM2C-210ENST00000620962 501 ntBASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE9Q8IYJ1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms