Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCDC144CPQ8IYA2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC144CPQ8IYA2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 AP000974.1-201ENST00000623909 2387 ntBASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 AP000525.1-201ENST00000608286 694 ntBASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 KRT8P9-201ENST00000558927 1449 ntBASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC144CPQ8IYA2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 UNC93B2-201ENST00000285383 730 ntBASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC144CPQ8IYA2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 KSR1P1-201ENST00000446298 240 ntBASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 AL160286.2-201ENST00000567150 934 ntBASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 MIR6786-201ENST00000616843 113 ntBASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CCDC144CPQ8IYA2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms