Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS4Q8IUM7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 AC024243.1-201ENST00000609234 778 ntBASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 AC012313.10-201ENST00000623509 926 ntBASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 AC036111.1-201ENST00000533973 1582 ntBASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NPAS4Q8IUM7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NPAS4Q8IUM7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 MCCD1P1-208ENST00000445732 328 ntBASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 MIR3180-5-201ENST00000583743 153 ntBASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 AC092119.3-201ENST00000612618 583 ntBASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAS4Q8IUM7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAS4Q8IUM7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms