Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD2Q7Z408 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 RNF126P1-202ENST00000569893 925 ntBASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AC024243.1-201ENST00000609234 778 ntBASIC16.13■□□□□ 0.17
CSMD2Q7Z408 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 AC121338.2-201ENST00000622535 1744 ntBASIC16.13■□□□□ 0.17
CSMD2Q7Z408 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 MIR662-201ENST00000384847 95 ntBASIC16.13■□□□□ 0.17
CSMD2Q7Z408 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 KRT16P6-202ENST00000425692 1426 ntBASIC16.13■□□□□ 0.17
CSMD2Q7Z408 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD2Q7Z408 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 SEC1P-202ENST00000473944 940 ntBASIC16.12■□□□□ 0.17
CSMD2Q7Z408 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 AL160286.2-201ENST00000567150 934 ntBASIC16.12■□□□□ 0.17
CSMD2Q7Z408 AP001005.1-201ENST00000571755 1248 ntBASIC16.12■□□□□ 0.17
CSMD2Q7Z408 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD2Q7Z408 AL035633.1-201ENST00000406139 838 ntBASIC16.11■□□□□ 0.17
CSMD2Q7Z408 AC005104.2-201ENST00000427818 678 ntBASIC16.11■□□□□ 0.17
CSMD2Q7Z408 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 AP001160.2-201ENST00000596071 487 ntBASIC16.11■□□□□ 0.17
CSMD2Q7Z408 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD2Q7Z408 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms