Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC149Q6ZUS6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC149Q6ZUS6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC149Q6ZUS6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 STARP1-201ENST00000397973 869 ntBASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 TCF3P1-201ENST00000423021 1937 ntBASIC20.06■□□□□ 0.8
CCDC149Q6ZUS6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 AC092667.1-201ENST00000434301 2586 ntBASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 LINC01311-201ENST00000565162 1445 ntBASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 TSPY23P-201ENST00000440136 739 ntBASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC149Q6ZUS6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC149Q6ZUS6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms