Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00336Q6ZUF6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 KRT8P10-201ENST00000450021 1447 ntBASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 PHGDH-210ENST00000641115 1638 ntBASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00336Q6ZUF6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 AL160286.2-201ENST00000567150 934 ntBASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 NPAP1P7-201ENST00000613027 823 ntBASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 FZD10-202ENST00000539839 3282 ntBASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00336Q6ZUF6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 KRT8P8-201ENST00000434750 1448 ntBASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 AC034232.1-201ENST00000506026 1064 ntBASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LINC00336Q6ZUF6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms