Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 WIZP1-201ENST00000531444 2299 ntBASIC21.59■■□□□ 1.05
SHC4Q6S5L8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SHC4Q6S5L8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 Z85996.1-201ENST00000494644 937 ntBASIC21.58■■□□□ 1.05
SHC4Q6S5L8 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SHC4Q6S5L8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
SHC4Q6S5L8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SHC4Q6S5L8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SHC4Q6S5L8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.58■■□□□ 1.04
SHC4Q6S5L8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.58■■□□□ 1.04
SHC4Q6S5L8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 KRT16P5-201ENST00000455284 522 ntBASIC21.57■■□□□ 1.04
SHC4Q6S5L8 RN7SL471P-201ENST00000580476 299 ntBASIC21.57■■□□□ 1.04
SHC4Q6S5L8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SHC4Q6S5L8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 AC133681.1-201ENST00000465482 601 ntBASIC21.56■■□□□ 1.04
SHC4Q6S5L8 AC073648.6-201ENST00000641589 218 ntBASIC21.56■■□□□ 1.04
SHC4Q6S5L8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SHC4Q6S5L8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 AC083906.6-201ENST00000641366 219 ntBASIC21.55■■□□□ 1.04
SHC4Q6S5L8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SHC4Q6S5L8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SHC4Q6S5L8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SHC4Q6S5L8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms