Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD4Q5XG99 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 AP002383.4-201ENST00000442518 975 ntBASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 KRT8P26-201ENST00000534154 1276 ntBASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD4Q5XG99 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 AL512408.1-201ENST00000569378 2000 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 AL162741.1-201ENST00000565563 1558 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 AL023284.2-201ENST00000405850 579 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 MCCD1P1-208ENST00000445732 328 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 MIR3180-5-201ENST00000583743 153 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 KRT8P10-201ENST00000450021 1447 ntBASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
LYSMD4Q5XG99 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 AC093525.10-201ENST00000625130 1569 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 CHCHD2P8-201ENST00000429873 447 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 NUS1P1-201ENST00000446295 882 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 KRT17P6-201ENST00000453795 1220 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 UNC93B7-201ENST00000509439 705 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 AC073314.1-201ENST00000568729 2216 ntBASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD4Q5XG99 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms