Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
FREM1Q5H8C1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 FP475955.4-201ENST00000623131 1990 ntBASIC16.8■□□□□ 0.28
FREM1Q5H8C1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 AC005332.7-201ENST00000614046 2005 ntBASIC16.8■□□□□ 0.28
FREM1Q5H8C1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FREM1Q5H8C1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 NAPSB-206ENST00000562112 1266 ntBASIC16.79■□□□□ 0.28
FREM1Q5H8C1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 AL049812.1-201ENST00000432563 2267 ntBASIC16.79■□□□□ 0.28
FREM1Q5H8C1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 CKBP1-201ENST00000565489 1086 ntBASIC16.79■□□□□ 0.28
FREM1Q5H8C1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FREM1Q5H8C1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TERF1P1-201ENST00000311003 1181 ntBASIC16.78■□□□□ 0.28
FREM1Q5H8C1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TMPOP1-202ENST00000424642 1267 ntBASIC16.78■□□□□ 0.28
FREM1Q5H8C1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 KRT18P21-201ENST00000515767 1272 ntBASIC16.78■□□□□ 0.28
FREM1Q5H8C1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FREM1Q5H8C1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.77■□□□□ 0.28
FREM1Q5H8C1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms