Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 AL359736.2-201ENST00000621992 437 ntBASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCGF3Q3KNV8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.91■□□□□ 0.3
PCGF3Q3KNV8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 AL049812.1-201ENST00000432563 2267 ntBASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 AC009237.14-201ENST00000609975 1594 ntBASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 AC133681.1-201ENST00000465482 601 ntBASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCGF3Q3KNV8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF3Q3KNV8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PCGF3Q3KNV8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF3Q3KNV8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCGF3Q3KNV8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCGF3Q3KNV8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms