Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 TSPY21P-201ENST00000433481 731 ntBASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 TSPY23P-201ENST00000440136 739 ntBASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 PHGDH-210ENST00000641115 1638 ntBASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 DPP3P2-201ENST00000416030 1696 ntBASIC20.45■□□□□ 0.86
CTC1Q2NKJ3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 FDX1P1-201ENST00000449115 551 ntBASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 KRT8P45-201ENST00000414328 1447 ntBASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.44■□□□□ 0.86
CTC1Q2NKJ3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 STARP1-201ENST00000397973 869 ntBASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 NPAP1P7-201ENST00000613027 823 ntBASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTC1Q2NKJ3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 TMEM179-206ENST00000616017 1645 ntBASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTC1Q2NKJ3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 SMG8-203ENST00000578922 2178 ntBASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 AP000523.1-201ENST00000398242 1049 ntBASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms