Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
RSPO4Q2I0M5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 HLA-F-220ENST00000434407 884 ntBASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 AC098831.1-202ENST00000438821 336 ntBASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 RPL13AP23-201ENST00000480739 586 ntBASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 RNF126P1-202ENST00000569893 925 ntBASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 AP001160.2-201ENST00000596071 487 ntBASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RSPO4Q2I0M5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 RPS8P6-201ENST00000426177 609 ntBASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 AC244107.1-201ENST00000442033 332 ntBASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RSPO4Q2I0M5 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 AC121338.2-201ENST00000622535 1744 ntBASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 MIR3197-201ENST00000582241 73 ntBASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 ZNF259P1-201ENST00000407656 1365 ntBASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 DPP3P2-201ENST00000416030 1696 ntBASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RSPO4Q2I0M5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 AC243591.1-201ENST00000452967 1364 ntBASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 AF186996.4-201ENST00000467186 377 ntBASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RSPO4Q2I0M5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms