Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC073648.6-201ENST00000641589 218 ntBASIC18.8■□□□□ 0.6
CDKL1Q00532 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.8■□□□□ 0.6
CDKL1Q00532 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.8■□□□□ 0.6
CDKL1Q00532 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL1Q00532 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL1Q00532 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL1Q00532 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CDKL1Q00532 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.8■□□□□ 0.6
CDKL1Q00532 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDKL1Q00532 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDKL1Q00532 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDKL1Q00532 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CDKL1Q00532 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL1Q00532 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL1Q00532 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 AC006058.3-201ENST00000606217 1069 ntBASIC18.79■□□□□ 0.6
CDKL1Q00532 AC124016.1-201ENST00000609552 612 ntBASIC18.79■□□□□ 0.6
CDKL1Q00532 HLA-A-209ENST00000638375 975 ntBASIC18.79■□□□□ 0.6
CDKL1Q00532 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CDKL1Q00532 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.79■□□□□ 0.6
CDKL1Q00532 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CDKL1Q00532 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.79■□□□□ 0.6
CDKL1Q00532 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDKL1Q00532 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.79■□□□□ 0.6
CDKL1Q00532 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CDKL1Q00532 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL1Q00532 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL1Q00532 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL1Q00532 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CDKL1Q00532 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL1Q00532 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDKL1Q00532 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 POU5F1P3-201ENST00000428824 1078 ntBASIC18.78■□□□□ 0.6
CDKL1Q00532 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.78■□□□□ 0.6
CDKL1Q00532 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.78■□□□□ 0.6
CDKL1Q00532 AC110285.5-201ENST00000611501 352 ntBASIC18.78■□□□□ 0.6
CDKL1Q00532 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.78■□□□□ 0.6
CDKL1Q00532 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDKL1Q00532 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL1Q00532 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL1Q00532 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
CDKL1Q00532 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDKL1Q00532 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDKL1Q00532 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.77■□□□□ 0.6
CDKL1Q00532 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL1Q00532 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDKL1Q00532 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDKL1Q00532 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL1Q00532 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CDKL1Q00532 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.77■□□□□ 0.6
CDKL1Q00532 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.77■□□□□ 0.59
CDKL1Q00532 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL1Q00532 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL1Q00532 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CDKL1Q00532 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL1Q00532 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDKL1Q00532 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.77■□□□□ 0.59
CDKL1Q00532 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 AC128676.1-201ENST00000454392 318 ntBASIC18.76■□□□□ 0.59
CDKL1Q00532 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.76■□□□□ 0.59
CDKL1Q00532 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDKL1Q00532 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms