Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.53□□□□□ -0.24
RPL39P62891 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P62891 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.53□□□□□ -0.24
RPL39P62891 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P62891 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P62891 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P62891 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.52□□□□□ -0.24
RPL39P62891 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.52□□□□□ -0.24
RPL39P62891 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P62891 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RPL39P62891 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RPL39P62891 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.52□□□□□ -0.24
RPL39P62891 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL39P62891 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.52□□□□□ -0.25
RPL39P62891 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL39P62891 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.52□□□□□ -0.25
RPL39P62891 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.52□□□□□ -0.25
RPL39P62891 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P62891 AC116351.2-201ENST00000606540 1585 ntBASIC13.52□□□□□ -0.25
RPL39P62891 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RPL39P62891 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.52□□□□□ -0.25
RPL39P62891 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RPL39P62891 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RPL39P62891 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P62891 OR6D1P-202ENST00000641007 5290 ntBASIC13.51□□□□□ -0.25
RPL39P62891 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P62891 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 SDHAP1-207ENST00000440850 2000 ntBASIC13.51□□□□□ -0.25
RPL39P62891 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.51□□□□□ -0.25
RPL39P62891 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
RPL39P62891 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.51□□□□□ -0.25
RPL39P62891 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P62891 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RPL39P62891 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 AC067852.2-201ENST00000590513 2313 ntBASIC13.51□□□□□ -0.25
RPL39P62891 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.51□□□□□ -0.25
RPL39P62891 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RPL39P62891 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL39P62891 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL39P62891 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL39P62891 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL39P62891 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL39P62891 AL355472.2-201ENST00000422958 438 ntBASIC13.5□□□□□ -0.25
RPL39P62891 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL39P62891 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RPL39P62891 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.5□□□□□ -0.25
RPL39P62891 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.5□□□□□ -0.25
RPL39P62891 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms