Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2NP61088 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2NP61088 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.82■□□□□ 0.28
UBE2NP61088 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 FAM207BP-201ENST00000447172 505 ntBASIC16.82■□□□□ 0.28
UBE2NP61088 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
UBE2NP61088 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2NP61088 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2NP61088 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
UBE2NP61088 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
UBE2NP61088 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2NP61088 AL158211.5-201ENST00000623583 2518 ntBASIC16.81■□□□□ 0.28
UBE2NP61088 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 RBM17P1-201ENST00000453646 1190 ntBASIC16.81■□□□□ 0.28
UBE2NP61088 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 AC011506.1-201ENST00000474329 610 ntBASIC16.81■□□□□ 0.28
UBE2NP61088 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2NP61088 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 AC130371.2-201ENST00000619443 611 ntBASIC16.81■□□□□ 0.28
UBE2NP61088 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
UBE2NP61088 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2NP61088 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
UBE2NP61088 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2NP61088 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBE2NP61088 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.8■□□□□ 0.28
UBE2NP61088 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
UBE2NP61088 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.8■□□□□ 0.28
UBE2NP61088 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.8■□□□□ 0.28
UBE2NP61088 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.8■□□□□ 0.28
UBE2NP61088 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 SLC25A1P4-201ENST00000567977 778 ntBASIC16.8■□□□□ 0.28
UBE2NP61088 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.8■□□□□ 0.28
UBE2NP61088 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2NP61088 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2NP61088 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2NP61088 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBE2NP61088 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.79■□□□□ 0.28
UBE2NP61088 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms