Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLDN20P56880 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN20P56880 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN20P56880 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLDN20P56880 KSR1P1-201ENST00000446298 240 ntBASIC17.52■□□□□ 0.4
CLDN20P56880 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.52■□□□□ 0.4
CLDN20P56880 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.52■□□□□ 0.4
CLDN20P56880 CR392000.1-201ENST00000624770 1228 ntBASIC17.52■□□□□ 0.4
CLDN20P56880 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.52■□□□□ 0.4
CLDN20P56880 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLDN20P56880 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN20P56880 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CLDN20P56880 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CLDN20P56880 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.52■□□□□ 0.39
CLDN20P56880 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN20P56880 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN20P56880 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLDN20P56880 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.52■□□□□ 0.39
CLDN20P56880 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLDN20P56880 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CLDN20P56880 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN20P56880 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CLDN20P56880 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN20P56880 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.51■□□□□ 0.39
CLDN20P56880 AC007613.1-201ENST00000572811 2597 ntBASIC17.51■□□□□ 0.39
CLDN20P56880 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLDN20P56880 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN20P56880 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CLDN20P56880 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
CLDN20P56880 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.5■□□□□ 0.39
CLDN20P56880 HLA-A-209ENST00000638375 975 ntBASIC17.5■□□□□ 0.39
CLDN20P56880 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CLDN20P56880 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 AC093484.2-201ENST00000580996 2166 ntBASIC17.5■□□□□ 0.39
CLDN20P56880 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.5■□□□□ 0.39
CLDN20P56880 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.5■□□□□ 0.39
CLDN20P56880 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLDN20P56880 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLDN20P56880 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN20P56880 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN20P56880 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN20P56880 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms